Software for network analysis

Networks are universal and generic data structures that are used in all areas of research. There are several great applications for network data and there are several powerful tools for working with them.

ToolDescription
Cytoscape Software platform for visualizing complex networks
igraph Network analysis package
Gephi Network visualization and exploration software
... ...

Many tools focus on visualization of existinting network connections or on statistical analyses. Most run as desktop applications.

In comparison, the NetworkCurator runs on the web and thus enables collaborative exploration and annotation. It also couples a content management system to each graph node and link, creating opportunities for communities to discuss and to curate these individual components.